Neon Genesis Evangelion has things about gods and angels through another point of view. Then theres spice and wolf, which is about a merchant running into The wolf goddes of the harvest and making a pact with her, then theres Tayutama -Kiss on my Deity- which is about a boy who is the heir to a shrine and during the school entrance ceremony he runs into a girl named mashiro who is a reincarnation of the goddess who protected the area.
All magic side members get their power through religion. So stuff like "the power of God", archangels, saints, and references to religion and mythology are pretty common. The light novels had an entire side story dedicated to Norse Mythology.